PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021279076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 345aa MW: 37304.6 Da PI: 8.4776 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58 | 1.3e-18 | 260 | 294 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +l XP_021279076.1 260 CMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRL 294 99*****************************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 345 aa Download sequence |
MNNSWFDKTF NGVNDDFFDD VIKYLDFPLE DVEANDGTGG GSSGEDVIKD FHLPLEDSGG 60 DGGGGGGEEW DCNFQNLEPP PANVLAGLSS GFYGDFFSDS LAKNLTVSCD GSSQLNQRSS 120 TTKASSSRSI TLNSESADLK GSNQFQTSSP VSVLESSSSC SAANLTPIDP NLSFLAKRGR 180 SKRRRVSTFN LQFSLPFISS TSSTSRGSNS LVGSESESES HLTEKSAKKR QKKKKNLTLL 240 SGSSEIKKSP SQQPVVVRKC MHCEVTKTPQ WREGPMGPKT LCNACGVRYR SGRLLPEYRP 300 AASPTFVPSL HSNSHKKVVE MRKKAKLPMS VMPSMLSIPP ENSFG |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 182 | 186 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08010.2 | 2e-43 | GATA family protein |