PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021278986.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 399aa MW: 45644.6 Da PI: 7.2893

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021278986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.8	3e-51	63	189	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrFhP+deel+ +yL++kv++++l++ +vi+e+d+yk++Pw+Lp+ +e+ewyfFs+rd+ky++g+r+nra++sgyWkatg+dk++l++ XP_021278986.1 63 PPGFRFHPSDEELIIHYLQNKVTSRPLPA-SVIAEIDLYKYNPWELPSLSLFGEDEWYFFSPRDRKYPNGERPNRAAASGYWKATGTDKPILTSs 156 9**************************.99***********65556899********************************9986 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk Lvfy+gr pkg+kt+W+m+eyrl XP_021278986.1 157 GSKNIGVKKALVFYTGRPPKGVKTEWIMNEYRL 189 8889*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MSNDIHSKQK LEKKTQGPNK EPQRFVILLV LLHFPGLFII SYEKNGKKST SMETEPNLNF 60 HFPPGFRFHP SDEELIIHYL QNKVTSRPLP ASVIAEIDLY KYNPWELPSL SLFGEDEWYF 120 FSPRDRKYPN GERPNRAAAS GYWKATGTDK PILTSSGSKN IGVKKALVFY TGRPPKGVKT 180 EWIMNEYRLL KTIIKPSRLK GSMRLDDWVL CRVRKKGNIS KNTFEVQDSC STELMRFSHT 240 IEELHPTFTD CRTDMITNCL NQDCQVLALL LASQALSPTE TNSTATFHGS NERNSFISVY 300 EEGSDKVNLP TLNPSLDNYF NPLTRKLSLG NGEENLLPSD KKLNDDKRNE DFLPMEILSK 360 NDLNYASQNQ SQDGIYNPCP SDSIIEFQEL NNWPSHIHA

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MSNDIHSKQK LEKKTQGPNK EPQRFVILLV LLHFPGLFII SYEKNGKKST SMETEPNLNF  60
HFPPGFRFHP SDEELIIHYL QNKVTSRPLP ASVIAEIDLY KYNPWELPSL SLFGEDEWYF  120
FSPRDRKYPN GERPNRAAAS GYWKATGTDK PILTSSGSKN IGVKKALVFY TGRPPKGVKT  180
EWIMNEYRLL KTIIKPSRLK GSMRLDDWVL CRVRKKGNIS KNTFEVQDSC STELMRFSHT  240
IEELHPTFTD CRTDMITNCL NQDCQVLALL LASQALSPTE TNSTATFHGS NERNSFISVY  300
EEGSDKVNLP TLNPSLDNYF NPLTRKLSLG NGEENLLPSD KKLNDDKRNE DFLPMEILSK  360
NDLNYASQNQ SQDGIYNPCP SDSIIEFQEL NNWPSHIHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	4e-81	NAC family protein