PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34447.7 Da PI: 9.8072 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.1 | 1.1e-09 | 28 | 74 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT+eE + + +a + + ++ +W ++a++++ g+t +++ ++k+ XP_021278855.1 28 KWTPEENKMFENALAVYDKDtpdRWQKVAAMIP-GKTVGDVIKQYRKL 74 8********************************.***********997 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 135 | 179 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky XP_021278855.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MKWEMEILSP TSYISSTNWF LEESKSTKWT PEENKMFENA LAVYDKDTPD RWQKVAAMIP 60 GKTVGDVIKQ YRKLEADVSS IEAGLVPIPG YSTSPFTLDW VNSHGYDGLK HSYGLGGKRP 120 SSGRPAEQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVTRTPT QVASHAQKYF 180 IRQLSGGKDK RRASIHDITT VNLNDTRTPS PDNKGTPSPE QSSVLPQQPT SAAMPRTHFQ 240 WNQPCSGATM AFNSTQGNLL MSSPYGIPSY GVKMQGQSLH RSAAHESYFG PQNLVFQMQS 300 AQQYPHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 1e-112 | MYB_related family protein |