PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278699.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 212aa MW: 24587.5 Da PI: 6.6424 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.3 | 1.7e-08 | 11 | 56 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +W+ d+l+ +a +++ + +W++Ia+ ++ g+++ ++k ++ + XP_021278699.1 11 SWSWHQDKLFERALIMFPEEspdRWEKIAAQLP-GKSAMEVKKHYAD 56 7*****************99*************.**********965 PP | |||||||
2 | Myb_DNA-binding | 44.1 | 4.9e-14 | 109 | 153 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r Rt+ q+ s+ qky XP_021278699.1 109 PWTEEEHRLFLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKY 153 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MIRSNNDFPS SWSWHQDKLF ERALIMFPEE SPDRWEKIAA QLPGKSAMEV KKHYADLEHD 60 VMEIESGRVQ MPSYEGELES ASWVNESGGS QVWLGSKKER ESERRKGVPW TEEEHRLFLI 120 GLQKYGKGDW RSISRNAVVS RTPTQVASHA QKYFLRLNSI NKKDKKRSSI HDITMADDIS 180 NQYGVGTMGD HSSIELMDQS KFFNEQGRSF WE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 2e-66 | MYB family protein |