PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 249aa MW: 28711 Da PI: 9.4746 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.7 | 2.4e-14 | 65 | 117 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR+++Ns ++ Lr+llP a + kKls +++ +A +YI +Lq XP_021278531.1 65 KKLNHNASERDRRKKVNSLYSSLRSLLPVA--DRMKKLSFPATVSHALKYIAELQ 117 6789*************************6..49999****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MCALPAPIPK WPVINPTVYE QNYIYGGSQS VESFLHFPPP QEEILLDHRS PSFTIQNSPD 60 PSTVKKLNHN ASERDRRKKV NSLYSSLRSL LPVADRMKKL SFPATVSHAL KYIAELQEQV 120 ERLVQKKEKL LLRISQRGGL KREEQQRKSR LGRSLSSAIS INRLTDSEIA IQISMHKVDQ 180 KNQLSQILQY LEQDGLFLLL NATCFESFRG MDVFYNIHLQ VETTYKLESE ALSEKLLSIL 240 FDNREDLLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 2e-48 | bHLH family protein |