PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GATA | ||||||||
Protein Properties | Length: 255aa MW: 28234.1 Da PI: 9.2133 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.8 | 1.5e-18 | 201 | 237 | 1 | 35 |
GATA 1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs nC+t +Tp+WR+gp g+ktLCnaCG++yrk+++ XP_021278513.1 201 CSnyNCNTNDTPMWRKGPLGPKTLCNACGIKYRKEEE 237 55559*****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDNSHQWFNQ ADRMTGYNNN NNVSNRVDLT LKLGLPDCDL QNPLVYQMGQ YANPTSITPN 60 HLANLSYAGP NTQGMNQLEM ANQEAMAQGQ QGFNASQSAW PSDQIASNVH SMNCANAFKE 120 ICGPSMGFPA NGTNTYNNFA PTHHHQLLPG SVPTNNYTLL DVPPRRTADQ REVGNSSTSG 180 LGKRGQRRQR GGNYNDPNKR CSNYNCNTND TPMWRKGPLG PKTLCNACGI KYRKEEEKRK 240 AKEARSKGQQ SNHNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20750.1 | 3e-14 | GATA family protein |