PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278320.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 270aa    MW: 30280.6 Da    PI: 5.8354
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-19121171155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp++   r  ++lg+f+t+eeAa  +++a++ l+g
  XP_021278320.1 121 KKFRGVRQRP-WGRWAAEIRDPTQ---RNEVWLGTFDTPEEAATVYDKAALLLKG 171
                     59********.**********976...48*********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSPQTQYSFS DMVKFTEHVI TTNKAPPQPT RNIPQKLLRI ILTDADATDS SSDEEHDQPT  60
PTRRRLNTVR RVKRHVKEIN FQPLSASSSA STSTTSKSLV KQQPSTKRER PSPQSDVTRR  120
KKFRGVRQRP WGRWAAEIRD PTQRNEVWLG TFDTPEEAAT VYDKAALLLK GPNALTNFPN  180
PVSTEKKAAV DQRQGDSLDS SPCSSLSLST SVLRCEELTP FDGLGYFDVD AFGFQIDVPS  240
YSTDLSLSDS IFAKEEEFSD FNVDDFLVGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.11e-30ERF family protein