PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 291aa MW: 31161.7 Da PI: 4.5118 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.8e-05 | 265 | 288 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+ksF + L++H + H XP_021278310.1 265 FSCGSCNKSFGSEGGLESHKKAkH 288 89*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MEFWGIEVKA GKPIKADPGA NHVIHLSQAT LGESKNKAES VTLHVNADGQ KLVLGTLSHQ 60 NFPQLSFDLV FDQEFELSHN CKHGSVYFLG YKTFVPEEGT DDEFDMSSDE ESSEDEELPV 120 AAAENGKAKT DVKPSKVNAG KPDALKQAVK IEEPSNNKKT EDDDESDSED ESGSDEEDDS 180 EDEDESDEMS MDESSDDEDE GTPKKVEASK KRPAEAATPV SAKKAKSAAT PQKTDDKKGG 240 HTATPHPSKQ AGKSSAKSPK SGGQFSCGSC NKSFGSEGGL ESHKKAKHGG K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 5e-36 | C2H2 family protein |