PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278281.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 271aa    MW: 29317.2 Da    PI: 7.8605
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19136186255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  XP_021278281.1 136 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 186
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEMYQSTIDS DLAMLESIRR HLLGEPSDLR LTASTDCTTA PPMFCRSSSF SRLYPCLTET  60
WGELPLKEDD SEDMLVFGFL RDALTEGWAP SDNSSTNFPP IKPEPQEILT ETPVKKVATT  120
VAATAVPAVV PAKGKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDRA  180
AYRMRGSRAL LNFPLRVNSG EPDPVRVTSK RASPEPSSSS SSGSVNGSPK RRRKVAASAP  240
VVAQAGLDMG SGAEVKCQVG SCTHGEQLLV S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229235PKRRRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-75ERF family protein