PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | AP2 | ||||||||
Protein Properties | Length: 480aa MW: 52322.9 Da PI: 6.5132 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 6e-17 | 153 | 202 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021278254.1 153 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 202 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence |
MLDLNLNAAS TELTQDSDSA APFTDKFNEG SGNQMDESGT SNSSVVNDDD ESCSTRANGD 60 AFTLSFDILR VGSGGSEYPN DDAAMVVTKE LFPVKGVGGD FGSCEGQSSG NGNNNKWIDL 120 SFERKEAGEP RMMQQQASQT VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL 180 GGFDTAHAAA RAYDRAAIKF RGVDADINFT LSDYEEDMTQ MKNLTKEEFV HILRRQSTGF 240 SRGSSKYRGV TLHKCGRWEA RMGQFLGKKA YDKAAIKCNG REAVTNFEPS SYEGEMTFDT 300 SNEDAVYAGN DHNLDLNLGI SPPVGKGLKE NEGHLHFHTG PYDMHGAKSL RAENPCAATV 360 GGPPIKGLVG ASDQPIFWNS GYPRFFPSEE RATVKRVELG PPQGLPDWAW QTHGQVSVTP 420 MPLFSTAASS GFSFSATPPS AAILPSRPLN PTTHSLCFAS PGATSTPQTY FHIKPPQAPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-130 | AP2 family protein |