PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021278245.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 313aa MW: 33549.3 Da PI: 9.6444

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021278245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	5.9e-39	57	117	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkk++ XP_021278245.1 57 PEVALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNK 117 56789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MVFSSVPVYL DPPNWQQGTG SENPQLPPPP HHVGVGAGSI RPGSMADRAR LAKIPQPEVA 60 LKCPRCESTN TKFCYFNNYS LSQPRHFCKT CRRYWTRGGA LRNVPVGGGC RRNKKNKSSS 120 SKSSASAEKQ VGNSNSTSAG NIPSEISGHL PRQTPHLPFM ASLQNFSQYG LGNIGLNFGG 180 IQGQIGATST GASGQADMGF QIGTNSGMSS AIFSAEGTHH QQFPFFEPAN GLYPFQSEGM 240 EASSSMVGES QLLRSMSSSS RASQTAPVKM ENNQGLNLSR QLLGVSENNQ YWGGNNWTDN 300 LSGLNSSNTN HLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-47	Dof family protein