PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278209.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 299aa    MW: 32999.6 Da    PI: 6.9721
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1291.3e-403697263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  XP_021278209.1 36 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 97
                    7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDPSSGQHQE MPNPSLENML VCTSRGQQER KPRPQPEQAL KCPRCDSTNT KFCYYNNYSL  60
SQPRYFCKSC RRYWTKGGTL RNVPVGGGCR KNKRSSSSSS SSKRSQDQPL TPNTNPLTSL  120
PPLSYDTNDL SLAFARLQKQ SSGQLGFDDH DLSILGNPTN TQCDILGNPN TSSAANPVFL  180
DALRSGFLGT HNHFQNFYYG FGNENMGEMD NGGGSVVVSG EMMLPYSEEM SNIAATTAVT  240
VTTMKQELCN GRESENRVLW GLPWQLNGDG NNMGDLDSGR ESWNGLNPTW HGLLNSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.11e-42Dof family protein