PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021278103.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 733aa MW: 79654 Da PI: 8.0937

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021278103.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	426	463	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_021278103.1 426 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 463 554459******************************88 PP
2	BELL	122.5	1.7e-39	290	361	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+s+l+eV++rY+qy++q+q+v+ssFe++ag g+a++Yt+lAl++iS++FrcLkdai++qi XP_021278103.1 290 QRQELQMKKAKLVSMLDEVEQRYRQYHHQMQIVVSSFEQAAGFGAARSYTALALQTISKQFRCLKDAISGQI 361 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MATYFHGSSE FQAASAAAPD GTMQTLYLMN PNYVPYSDTH QPAAATNMFF LNPAGNALNP 60 ANLPHAPPPN HHHLLGLPLP TPAASIGPGS SDDPHRPSSL HGIVSGVHYN LWGPNIDHQN 120 SPGSSHAQVV SAAAAAAANS GGAHEVASQL GLRRPVLSPR QGLSLSLSSQ QQVPYRSSNV 180 ETDIQGQSQV PTISLGDDMR ISGNSPSSVS VVSNGISGVQ SVVLGSKYLR AAQELLDEVV 240 NVGKGIKTDV SEGTKEKIKM NKESVAAVTG EGSSAGENGA KRAAELTTAQ RQELQMKKAK 300 LVSMLDEVEQ RYRQYHHQMQ IVVSSFEQAA GFGAARSYTA LALQTISKQF RCLKDAISGQ 360 IKATSKSLGE EDCLGVKVEG SRLRFVDHQL RQQRALQQLG MMQHNAWRPQ RGLPERAVSV 420 LRAWLFEHFL HPYPKDSDKH MLAKQTGLTR SQVSNWFINA RVRLWKPMVE EMYLEEVKER 480 ERNGSEENRN KSEQKESGSS SSAQQESAAL KMDQVKTQSK LDKSINQNTS PTEFSNTTIS 540 TSPMGGSLLP QTAFNLIGSS DLDGTVARRS PKKPRGINDM HNSPSSILSM DMDMKQGETR 600 EINIKFGEER LSKDSYSLLT GTANQGGGFG TYGAMGEIGR FDPEHLTPRF PGNSVSLTLG 660 LPHCDNLSLS GNQQNFLSNQ NIQLGRRLEL GPSESDFCGI NNQQASHSST GYENIEMQNR 720 KRFAAQLLPD FVA

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MATYFHGSSE FQAASAAAPD GTMQTLYLMN PNYVPYSDTH QPAAATNMFF LNPAGNALNP  60
ANLPHAPPPN HHHLLGLPLP TPAASIGPGS SDDPHRPSSL HGIVSGVHYN LWGPNIDHQN  120
SPGSSHAQVV SAAAAAAANS GGAHEVASQL GLRRPVLSPR QGLSLSLSSQ QQVPYRSSNV  180
ETDIQGQSQV PTISLGDDMR ISGNSPSSVS VVSNGISGVQ SVVLGSKYLR AAQELLDEVV  240
NVGKGIKTDV SEGTKEKIKM NKESVAAVTG EGSSAGENGA KRAAELTTAQ RQELQMKKAK  300
LVSMLDEVEQ RYRQYHHQMQ IVVSSFEQAA GFGAARSYTA LALQTISKQF RCLKDAISGQ  360
IKATSKSLGE EDCLGVKVEG SRLRFVDHQL RQQRALQQLG MMQHNAWRPQ RGLPERAVSV  420
LRAWLFEHFL HPYPKDSDKH MLAKQTGLTR SQVSNWFINA RVRLWKPMVE EMYLEEVKER  480
ERNGSEENRN KSEQKESGSS SSAQQESAAL KMDQVKTQSK LDKSINQNTS PTEFSNTTIS  540
TSPMGGSLLP QTAFNLIGSS DLDGTVARRS PKKPRGINDM HNSPSSILSM DMDMKQGETR  600
EINIKFGEER LSKDSYSLLT GTANQGGGFG TYGAMGEIGR FDPEHLTPRF PGNSVSLTLG  660
LPHCDNLSLS GNQQNFLSNQ NIQLGRRLEL GPSESDFCGI NNQQASHSST GYENIEMQNR  720
KRFAAQLLPD FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-122	TALE family protein