PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021278006.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 339aa MW: 38591.7 Da PI: 8.452

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021278006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.3	1.3e-31	52	105	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+ekAtPk +l+lm+++gL+++hvkSHLQ+YR+ XP_021278006.1 52 PRLRWTPELHLCFVRAVERLGGQEKATPKLVLQLMNINGLSIAHVKSHLQMYRS 105 8****************************************************7 PP
2	Myb_DNA-binding	51.5	2.3e-16	53	104	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ + m+ +g++ ++ks++q+y+ XP_021278006.1 53 RLRWTPELHLCFVRAVERLGGQekaTPKLVLQLMNiNGLSIAHVKSHLQMYR 104 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MKRNPLNMDE EEEGDDERKT RNSASSSNSI VEVDEKKAAS SGVRPYVRSK MPRLRWTPEL 60 HLCFVRAVER LGGQEKATPK LVLQLMNING LSIAHVKSHL QMYRSKKIDD QGQVLNNKQL 120 LGSVDNLSQN LWHQAMLHDQ RISSDFSDIS WSAFCGNRMS EPYLTNCIYS RRKAGSGGSD 180 MNEELGSKVR NEVFYMNNNF IFNQQPARKM EDLQDKLQLP DDCETIQAQM QPILMHPSFA 240 NKYIGGRGAE RQRIAKRKAL DGDLDLSLSL STKLRQEVRR KTSNIEEEAA DRDLSLSLYS 300 PSKTEMYSVN VNMVSKSCKL KEDDSTMNLK LSSTLDLTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-43	G2-like family protein