PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021277951.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 277aa    MW: 30483.4 Da    PI: 7.1677
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021277951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.5e-1852102155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + ++GVr++k  ++Wv+e+r+p++   + r++lg+f ++e+Aa+a++ a+++l+g
  XP_021277951.1  52 PVFRGVRQRK-GNKWVCEVREPYK---KSRIWLGTFPSPEMAARAYDVAALALRG 102
                     579******9.9*********765...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEHLELDSSS PSSSSSSCKS CSPDSESSSA EALPVSHKRK AGRKKFKETR HPVFRGVRQR  60
KGNKWVCEVR EPYKKSRIWL GTFPSPEMAA RAYDVAALAL RGKSAALNFP DSASVLPRAK  120
SSSAKDIQRA ALTAAEAFRP AAHCPSSASS LSLSLHLSSR ATSSRKIEPE CSSSLISNAT  180
NQDKVLEPRL VEIKPIDQNE EKKVLDHSLM DHMPSSETLE TKPNQSNPLF IDEEALFNLP  240
GLLDSMAEGM LLTPPAMQRQ VDWDDDTAFT MNIDLWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.12e-38ERF family protein