PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021277077.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

VOZ

Protein Properties

Length: 453aa MW: 50478.7 Da PI: 5.2531

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021277077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	439.5	4.2e-135	207	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsaflgpkcalwdctrp qgs+w+ dycssfhatlalne++pg+tp+lrp+gi+lkd+ll++al+ak+qgk+vgip+cegaat+kspwna+el XP_021277077.1 207 PPPSAFLGPKCALWDCTRPGQGSDWYYDYCSSFHATLALNEDPPGMTPILRPGGISLKDNLLLDALRAKTQGKNVGIPQCEGAATMKSPWNATEL 301 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdlsllege irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgg+krsyymdpqp++++ewhl+eyei+ +da+alyrlelkl+ XP_021277077.1 302 FDLSLLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGQKRSYYMDPQPPGQYEWHLFEYEIYGCDAFALYRLELKLA 396 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 +ekks+k kvskdsladlqkk+grlta XP_021277077.1 397 NEKKSPKVKVSKDSLADLQKKMGRLTA 423 ***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MQNISKNKCT SASHQLMVDN AKNRLNNLQE RFTDLQAARK EGRAADVAVL EEQVYQSLRE 60 WKAELCTPSP TTSLLGGSLG SFSDDINRLL LLYEEEDDAS SPLKGPAVLK PETDVQSLNP 120 CNLPVVPEDY LVNHEPQQHD FQGFDPCKVS TSALETTVVG NADINYQLDY HPFDLQQEFD 180 HGPLIGANGA EDCVKDASPN ILPNISPPPS AFLGPKCALW DCTRPGQGSD WYYDYCSSFH 240 ATLALNEDPP GMTPILRPGG ISLKDNLLLD ALRAKTQGKN VGIPQCEGAA TMKSPWNATE 300 LFDLSLLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKEFGGQKRS 360 YYMDPQPPGQ YEWHLFEYEI YGCDAFALYR LELKLANEKK SPKVKVSKDS LADLQKKMGR 420 LTAEVPGDDR SPGKGKTKAS KKADARNVSS AQD

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MQNISKNKCT SASHQLMVDN AKNRLNNLQE RFTDLQAARK EGRAADVAVL EEQVYQSLRE  60
WKAELCTPSP TTSLLGGSLG SFSDDINRLL LLYEEEDDAS SPLKGPAVLK PETDVQSLNP  120
CNLPVVPEDY LVNHEPQQHD FQGFDPCKVS TSALETTVVG NADINYQLDY HPFDLQQEFD  180
HGPLIGANGA EDCVKDASPN ILPNISPPPS AFLGPKCALW DCTRPGQGSD WYYDYCSSFH  240
ATLALNEDPP GMTPILRPGG ISLKDNLLLD ALRAKTQGKN VGIPQCEGAA TMKSPWNATE  300
LFDLSLLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKEFGGQKRS  360
YYMDPQPPGQ YEWHLFEYEI YGCDAFALYR LELKLANEKK SPKVKVSKDS LADLQKKMGR  420
LTAEVPGDDR SPGKGKTKAS KKADARNVSS AQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-153	VOZ family protein