PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021277035.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 295aa    MW: 32843.9 Da    PI: 9.4711
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021277035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.42.3e-19164197134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_021277035.1 164 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 197
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTSSNCYSSL YPFPIDLNED DQHQQHQLFS LKPQPPSLSS SSLTCPILFN PAVQEQAGGH  60
QREPHQLFQY QEDQDEPLES DSGLNLSLRK KEEGNENHQI ENSSAKWMSS KMRMMRKMIS  120
SDHADLSNSS TRKLVEQKQQ PSSSPDNSSN SSYNNNDNIT IRVCADCNTT KTPLWRSGPR  180
GPKSLCNACG IRQRKARRAM AAAAAANGTI VAAQTTPTMK SKLQDKSKRS SNSGCVAQLK  240
KKCKHNSQSQ GRKKLCFEDL RTILSKNSAF HRVFPQDEKE AAILLMALSY GLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-16GATA family protein