PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 260aa MW: 29381.2 Da PI: 7.5 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.5e-14 | 13 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 +g+WT+ Ed++l d vk +G g W +Ia++ ++R++k+c++rw +yl XP_021276938.1 13 KGAWTAFEDQILRDHVKIHGVGKWGKIAEKADvfmfvlsgLKRCGKSCRLRWVNYL 68 79****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.5e-15 | 74 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E++l++++ ++lG++ W++Ia +++ gRt++++k++w++ XP_021276938.1 74 RGNISQDEEDLIIRLQRLLGNR-WSLIAGRLP-GRTDNEIKNYWNTI 118 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MGRTSYTDGG LNKGAWTAFE DQILRDHVKI HGVGKWGKIA EKADVFMFVL SGLKRCGKSC 60 RLRWVNYLRP DVKRGNISQD EEDLIIRLQR LLGNRWSLIA GRLPGRTDNE IKNYWNTILR 120 KKVKVSNEPD KILKEPSNET VPSSNMEPFS TKTKLKGYSD ATFCPTAISI EHVDSGTLVK 180 APIDEGLETN KEADGDKRIS PFNIGSNYNT QDLMKDLNVE EISLSKLLHT DFQDIYEGNE 240 MMIKDYDSGS PFSSNQTQVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 9e-53 | MYB family protein |