PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 453aa MW: 51157.8 Da PI: 6.9296 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.6 | 4.9e-36 | 46 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_021276920.1 46 LPAGVKFDPTDQELI-EHLEAKVEAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 138 799************.99*********5553344444434666646**********.555666799******************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_021276920.1 139 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence |
MNKNNLGSVS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRSA TTVEGSNDPN SRRDSGSGSC 240 SSKEVILHRD EVSGAGVAAA LSSYAGAMDI QQLKSDHFSF TPFRKSFDEV GIGEASAARE 300 APTQGTCEEI REHPRPHHMA HDHQHQQQQQ QHHHTHHQLA TTAFHISRPS HPISTIISPP 360 PLHHTSIILD EDSFHVSRIM LQNESFQQQQ HQQQQQQQHH KLGGRSATGL EELIMGCTST 420 DIKEESSITN PQEAEWLKYS SFWPDPDNQD HHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-146 | NAC family protein |