PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ARR-B | ||||||||
Protein Properties | Length: 702aa MW: 76615.2 Da PI: 6.1384 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.2e-29 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G +kA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_021276879.1 208 KPRVVWSVELHRKFVAAVNQL-GLDKAVPKKILDLMNVEGLTRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 41.1 | 4.2e-13 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ XP_021276879.1 210 RVVWSVELHRKFVAAVNQLGLDkaVPKKILDLMNvEGLTRENVASHLQKYR 260 678***********************************************7 PP | |||||||
3 | Response_reg | 82.8 | 1e-27 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+++l+k +y +v+++ ++ al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ +++ + + G XP_021276879.1 26 VLAVDDDPICLKVLENLLRKCQY-HVTTTNQAITALKMLRENRnkYDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTKLVMKGITHG 118 799********************.***************999889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_021276879.1 119 ACDYLLKPVRIEELKN 134 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 702 aa Download sequence |
MAVEEKMGGS NGEDGGKDRF PVGMRVLAVD DDPICLKVLE NLLRKCQYHV TTTNQAITAL 60 KMLRENRNKY DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTKL VMKGITHGAC 120 DYLLKPVRIE ELKNIWQHVV RRKKTDSKDQ IKAPNQDKVR AGNGEFGQTS TGSSDQKVNK 180 KRKDQSEDEE EEGEDNGHEN DDPSSQKKPR VVWSVELHRK FVAAVNQLGL DKAVPKKILD 240 LMNVEGLTRE NVASHLQKYR LYLKRLSSVA TQQANMVAAL GSKDPSYLRM SSLDGFGDFR 300 TLTGPGRLSS ASLSSYQPGG MFGRLNSAAL SLRGISSGVI QPGHSQTLNN SINGLGKIQP 360 AVLPANQNQN GTLFQGIPTS IELNQLSQNK STNHFGEFNR VNDPNVFGVA TNFSDARVPG 420 GGSSNSLSTA SGNPLLLQAN TQQTHTSGSF GNQSSLGVAS LNQESFDMGV RGSSNFLDHG 480 RCSENWRGAV QLSSFPSSSL STSEAFNHEQ LPPNNLQENL SWTSSHVSNS PIDLSSSMAN 540 SARLEDSRGD MQCQVGLNNN VIQNIGYTAK QQWGDRRHDY NGNLNNSFSR VDSLVSASGA 600 VMDQSNAATS KRTDVSLFSQ LSGDAPYVVQ HPEGEKSALD AKLRSNEDYL FEQTKPQSGF 660 SQNNFESLED IMSSMIKQGQ NNDTALMDGE FGFDAYPLGS CI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-130 | ARR-B family protein |