PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 149aa MW: 16319.1 Da PI: 9.145 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.8e-19 | 18 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr +k +g+WvAe+r p++ r r++lg++ taeeAa+a++aa +l+g XP_021276831.1 18 TRYKGVRMRK-WGKWVAEVRQPNS---RGRIWLGSYKTAEEAARAYDAAVFCLRG 68 68******99.*******999843...48************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MVRPGRGRDN GVNNNSNTRY KGVRMRKWGK WVAEVRQPNS RGRIWLGSYK TAEEAARAYD 60 AAVFCLRGSS GKLNFPDNPP DIADASELPP AQIQEAAFRH ARKVITEEKE VKEEMAAGGN 120 SYGECYFGGG SVGDGSGGTC YQSSGFWTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 6e-29 | ERF family protein |