PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021276703.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 587aa MW: 65278.6 Da PI: 6.1985

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021276703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.9	1.7e-08	506	544	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_021276703.1 506 MFQNflHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVR 544 5887779******************************88 PP
2	BELL	82.9	4e-27	380	448	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 q +++kk++Ll+ll+ Vd+rY+q+ ++++tvis+F+a+++l++ ++++++Al++iS+ +++L+++i++qi XP_021276703.1 380 QTVEAKKTQLLTLLQVVDDRYSQCLDEIHTVISAFHAATELDP-QVHARFALQTISFLYKNLRERISNQI 448 67899************************************.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MMENDMFSIS QAMVSRNPVV VDGIPSQTAP NSIVESNSFN PINQNQTLAG FPVLPSAQGE 60 IISDLCADLH ITSHARFFDS NALVTSLGRT VVSDVSLGSS PSEDNMEFQD QFMGRTAISS 120 TPPAKCVLQE NLNQLEIIAP SMYPLDVRTY SSTNCSDGIN SSLVTSVNCV FNEALGNLNN 180 KWDFEKFPSP LELVGKPPLR TAFQPYTSIG CPDPNRWISS NGANMSIDYP CGSSKHSNEL 240 SLSLATSLPA VISSNIIPDQ SSEINCSGAN HFCLNTRRLG SEQTSCNAKE LSLSFGSYEP 300 VQVSHLISGS RYLHAVQEIL AQIASYSLEN LDQMSVGAGA TIPFSSSFLA ARGMALMDPN 360 ELPAIDGNSE VQLEPEVRKQ TVEAKKTQLL TLLQVVDDRY SQCLDEIHTV ISAFHAATEL 420 DPQVHARFAL QTISFLYKNL RERISNQILA MGANFDGGCT RVREKSFQNS FIQEQWALQQ 480 LKKKDQLWRP QRGLPEKSVS VLRAWMFQNF LHPYPKDAEK HLLAIKSGLT RSQVSNWFIN 540 ARVRLWKPMI EEMYSEMNRR KARQNEEGTH SNHRSQITIN NQRFNIN

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MMENDMFSIS QAMVSRNPVV VDGIPSQTAP NSIVESNSFN PINQNQTLAG FPVLPSAQGE  60
IISDLCADLH ITSHARFFDS NALVTSLGRT VVSDVSLGSS PSEDNMEFQD QFMGRTAISS  120
TPPAKCVLQE NLNQLEIIAP SMYPLDVRTY SSTNCSDGIN SSLVTSVNCV FNEALGNLNN  180
KWDFEKFPSP LELVGKPPLR TAFQPYTSIG CPDPNRWISS NGANMSIDYP CGSSKHSNEL  240
SLSLATSLPA VISSNIIPDQ SSEINCSGAN HFCLNTRRLG SEQTSCNAKE LSLSFGSYEP  300
VQVSHLISGS RYLHAVQEIL AQIASYSLEN LDQMSVGAGA TIPFSSSFLA ARGMALMDPN  360
ELPAIDGNSE VQLEPEVRKQ TVEAKKTQLL TLLQVVDDRY SQCLDEIHTV ISAFHAATEL  420
DPQVHARFAL QTISFLYKNL RERISNQILA MGANFDGGCT RVREKSFQNS FIQEQWALQQ  480
LKKKDQLWRP QRGLPEKSVS VLRAWMFQNF LHPYPKDAEK HLLAIKSGLT RSQVSNWFIN  540
ARVRLWKPMI EEMYSEMNRR KARQNEEGTH SNHRSQITIN NQRFNIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-117	TALE family protein