PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 29732.6 Da PI: 6.8985 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+d++k G g W I+++ g++R++k+c++rw++yl XP_021276285.1 14 RGAWSAIEDQILIDYIKTNGEGKWGNIPKKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021276285.1 67 RGNISQEEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNST 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MGRKPCCSKE GLNRGAWSAI EDQILIDYIK TNGEGKWGNI PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SQEEEDLIIR LHKLLGNRWS LIAGRIPGRT DNEIKNYWNS TLGKKVKAEQ 120 AKQSKDELEK GKIQPLAETP QSTALRTKAS KCSTCLVTQE AYKAEIINAD LVHEARLESP 180 KSGGTVLSTT SEEAHSVNSA LEFDIGELLA SDISESEFWN YCQVNKNSME EGESSGVARN 240 MWLSSDQHLQ FSEEMLTDWI RDDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 4e-61 | MYB family protein |