PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276268.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 314aa    MW: 35201.9 Da    PI: 10.2397
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.48.5e-18203237135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_021276268.1 203 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 237
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAHSTPPLLA GTRLTPPPLR PWTAAIRRRF RVANRISRVI WVAEVLLTVS SQYDDLAELE  60
WLSNFVEESF SSEDLQKLQL ISGMKTRPDE SSESGGFQPV LTNQMHNVIH NGDTEQGNNN  120
NNPIFHPDMS VPAKARSKRS RAAPCNWASR LLVLSPTTSS SEPDIVVPVQ PTPANQPGKK  180
PVKTKKKDGG EGGGLANSDG RKCLHCATDK TPQWRTGPMG PKTLCNACGV RYKSGRLVPE  240
YRPAASPTFV LTKHSNSHRK VLELRRQKEM LRAQHQHQQQ FMQQHHHQNM VFDVPNGDDY  300
LTHQHVGPEF RQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-78GATA family protein