PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 32406.2 Da PI: 6.049 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.2 | 7.7e-08 | 14 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l ++k +G g ++R++k+c++rw++yl XP_021275851.1 14 RGAWTALEDKILTAYIKAHGEG----------LKRCGKSCRLRWLNYL 51 89******************99..........68************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.9e-16 | 57 | 101 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++++lG++ W++Ia +++ gRt++++k++w++ XP_021275851.1 57 RGNISHDEEELIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 101 78999*****************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MGRSPCCSKE GLNRGAWTAL EDKILTAYIK AHGEGLKRCG KSCRLRWLNY LRPDIKRGNI 60 SHDEEELIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT TLGKRAKAQA SSPTSTETPP 120 SKSRHKKLTT EPQVTKPSNS PQATETKIQV IRTKATRCSS KVLIPLQPPP IQDIDPSEHQ 180 DFQPYLTNHE EINNNASVQS HHGTESLDAL YSHGQDFLNF EINDQLRASN EDSEENDINK 240 NPSLDPVQPL AFDEAMFKDW TTNPCLDDNA AMDLDSLAFL LEPDEWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 2e-54 | MYB family protein |