PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 308aa MW: 34779.2 Da PI: 6.6347 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.3 | 2e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ed++l d++k G g W+ I+++ g++R++k+c++rw +yl XP_021275847.1 14 RGAWTLTEDKILTDYIKVDGEGKWRNIPKEAGLKRCGKSCRLRWMNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.6e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_021275847.1 67 RGNISPDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7899******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MGRRPCCSKE GMNRGAWTLT EDKILTDYIK VDGEGKWRNI PKEAGLKRCG KSCRLRWMNY 60 LRPDIKRGNI SPDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKRGQGKE 120 RGPKSNHSKV GKKPITAKAD EDLVSSRVIR TKALRFKEVF ITPDDQQHRI ENHHRNLAMP 180 PSVDPNLVQN VPAGSESSDG SLITLSSNKE YPVDFMVDIS AGEISVPEIF ASDFTNFSHY 240 LGASEMDKVM QGDDADNYIS KISPSQAFLL PEEMEQNWSG SDNYIQANLD SDLGSLTAFL 300 ESAEEWLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 6e-62 | MYB family protein |