PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021275555.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 576aa MW: 63713.6 Da PI: 4.569

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021275555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.8	3.5e-52	9	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ ++ vi+e+d++k+ePwdLp +++++++ ew+fF++ d+ky++g+r nrat++gyWkatgkd++++ XP_021275555.1 9 LPIGFRFRPTDEELIDFYLRSKINGNRSDEVGVIREIDVCKCEPWDLPdlSAIETRDPEWFFFCPLDRKYPNGNRLNRATEAGYWKATGKDRKIK 103 699**********************99999***********96448888889*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfy+grap+g++t+Wv+heyr XP_021275555.1 104 S-GSSLIGMKKTLVFYTGRAPRGKRTNWVVHEYRT 137 .99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MATLSLNSLP IGFRFRPTDE ELIDFYLRSK INGNRSDEVG VIREIDVCKC EPWDLPDLSA 60 IETRDPEWFF FCPLDRKYPN GNRLNRATEA GYWKATGKDR KIKSGSSLIG MKKTLVFYTG 120 RAPRGKRTNW VVHEYRTTLD ELDGTKPGQN AFVICRLFKK EDETIEDING DEVDPAISTP 180 AEDMQSELVV PQDSPVVEGE AEKIPMSSET YAVDLPNEVI SNAVAPILEC NSNDYKAYGV 240 TGQVADIAPA EVDTLVEALN QFYDPMMDSL SCKLFSPLHS QIEAEQAPWM FNHVGNSFSG 300 VVLEHGTNEN DADISDFLND ILKNPDECCS DDSGSQKNST IESETPRAMA IGKDGSGGES 360 DAEVAQVLLG TETANRGGAP LEIKATAQDC TILNPKQDVN FSGAGPLFNV LNSNGELSNT 420 ACNVDNAITG IKIRSRIARS QPDTENSMTQ GNARRRIRLQ RKFQVGPLYC GNAMNDWSSE 480 EKEHNSNPVF KEEIKVVEED ITVDGTMDEP QEISLSGSCK NCLLRSKSIV SVCKEIQSRC 540 LKKFSARRSH KPFAVIFRVA VVSILFIILV STLYVL

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MATLSLNSLP IGFRFRPTDE ELIDFYLRSK INGNRSDEVG VIREIDVCKC EPWDLPDLSA  60
IETRDPEWFF FCPLDRKYPN GNRLNRATEA GYWKATGKDR KIKSGSSLIG MKKTLVFYTG  120
RAPRGKRTNW VVHEYRTTLD ELDGTKPGQN AFVICRLFKK EDETIEDING DEVDPAISTP  180
AEDMQSELVV PQDSPVVEGE AEKIPMSSET YAVDLPNEVI SNAVAPILEC NSNDYKAYGV  240
TGQVADIAPA EVDTLVEALN QFYDPMMDSL SCKLFSPLHS QIEAEQAPWM FNHVGNSFSG  300
VVLEHGTNEN DADISDFLND ILKNPDECCS DDSGSQKNST IESETPRAMA IGKDGSGGES  360
DAEVAQVLLG TETANRGGAP LEIKATAQDC TILNPKQDVN FSGAGPLFNV LNSNGELSNT  420
ACNVDNAITG IKIRSRIARS QPDTENSMTQ GNARRRIRLQ RKFQVGPLYC GNAMNDWSSE  480
EKEHNSNPVF KEEIKVVEED ITVDGTMDEP QEISLSGSCK NCLLRSKSIV SVCKEIQSRC  540
LKKFSARRSH KPFAVIFRVA VVSILFIILV STLYVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	1e-101	NAC family protein