PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24885.4 Da PI: 9.218 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.6e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021275526.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 80.7 | 3.4e-27 | 83 | 172 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + e+++++ + ++ + k+ie L+ ++R+llG++Le++s++eLq Le+qLe+sl++iR++Kn+ll eqie+l+ e++l een +Lr++ XP_021275526.1 83 ALEENMQNVKDDAHSMAKKIELLEDSKRKLLGNGLEPCSFNELQLLENQLERSLSRIRARKNQLLWEQIEKLKDEERRLGEENAKLREQC 172 56889**********************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS 60 SMNTTIERYQ KREKDYGICS KAALEENMQN VKDDAHSMAK KIELLEDSKR KLLGNGLEPC 120 SFNELQLLEN QLERSLSRIR ARKNQLLWEQ IEKLKDEERR LGEENAKLRE QCGMQPRQSP 180 ASQTDELHHV QSMEVETELF IGPPERRSTK NPSVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 4e-73 | MIKC_MADS family protein |