PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275187.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 563aa MW: 60671 Da PI: 7.4477 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 49.2 | 9.6e-16 | 351 | 397 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_021275187.1 351 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 397 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence |
MHHCVPDFEM GDDYSIPSSS SLTRPKKPPM PEDEIMELLW QNGQVVVQSQ NQRSFKKSPP 60 FKFHDADQSA PKEIRSSSSH HQHHQQQQQQ SITDHLFMQE DEMASWLHYP LNDANFDHDF 120 CADLLYPSSS AAAATPCITS TATAAPPPLG RVSQVSASAS ASAAAAASAP RPAIPPARRN 180 GSEPTRTKNF VHFSRHKTAT VEQSGPSNSK SVVRESTVVD SSDTPAMAPE SRASQAVPSN 240 TEAASGGNNN NACATVSAAA VASRQSAGVS VGATKDNLAT CEVTVTSSPG GSSASAEQAT 300 QKAAPAEDRK RKGIEPDDAE CHSEDAEFES ADIKKQTRGS TSTKRSRAAE VHNLSERRRR 360 DRINEKMRAL QELIPRCNKS DKASMLDEAI EYLKSLQLQV QMMSMGCGMV PMMFPGVQQY 420 MPTMGMGIGM GMGMDMGISR PMLPFPNVLA GSVLPTPAAA AHLGPRFPLP AFHMPPPVPP 480 PDPSRIQPNN QSEAMLNTLG MQNPTQPRAP NFADPYQQYL GLQQMQLPPL QSQGMAQPSS 540 RKPSSSRGAE NLKNHPSGRS IIF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 356 | 361 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.2 | 1e-59 | bHLH family protein |