PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | B3 | ||||||||
Protein Properties | Length: 489aa MW: 55201.7 Da PI: 8.0357 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60 | 4.2e-19 | 125 | 215 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f k l++s+v++ ++ lp f++ h ++ +++++++ledesg ++ vk+ +s+++ l++GW++F++ ++L egD+++F+l++ ++f +v XP_021275028.1 125 FAKSLVRSHVGSCFWMGLPGMFCKIH-LP-RRDTMVVLEDESGHQFHVKY----YSDKTGLSAGWRQFCSVHNLLEGDVLIFQLVEPTKF--KVY 211 889********************655.44.6788****************....555556***********************9876666..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_021275028.1 212 IIRA 215 9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 489 aa Download sequence |
MDQRVKKEAE EIQQRTTSFA GRRLKSTGEE DLTLAQLSHT PKLKPSSSGK KKKKKDKALT 60 ERKEKRKSQS ESIIKHEVSG PGGKHMSSKK NKGAGDGKCT PEIKSPAMIR AEEVQSNLEH 120 EFPSFAKSLV RSHVGSCFWM GLPGMFCKIH LPRRDTMVVL EDESGHQFHV KYYSDKTGLS 180 AGWRQFCSVH NLLEGDVLIF QLVEPTKFKV YIIRANDLTE LDGALGLLNL DAHTKQSDAE 240 DAEIGTTACK STKRKRPKSL PLAVVQKKNK RSGLQTNLGQ PAEQSENDSE EVGSEVLEGF 300 KLSVPTIQFK DITSFEKFSI LVDDLVVDSE LSEDIRHKYY NLCRSQNSFL HKNIIHGINF 360 KLIVGTISET VNIADAIRAC KLTTSQDEFD SWDKTLKAFE LLGMNVGFLR TRLRRLVNLV 420 FESEGAAEAR RYVEAKMERA QTEDEIRNLE AKLAELKDTC KTFGVEIESL QSHAETYELR 480 FEEEVQASW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 50 | 67 | KKKKKKDKALTERKEKRK |
2 | 50 | 92 | KKKKKKDKALTERKEKRKSQSESIIKHEVSGPGGKHMSSKKNK |
3 | 51 | 68 | KKKKKKDKALTERKEKRK |
4 | 51 | 93 | KKKKKKDKALTERKEKRKSQSESIIKHEVSGPGGKHMSSKKNK |
5 | 52 | 94 | KKKKKKDKALTERKEKRKSQSESIIKHEVSGPGGKHMSSKKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 3e-35 | B3 family protein |