PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274871.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 200aa    MW: 23216.4 Da    PI: 4.4085
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.63.7e-30101281128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelv ++L +k+   +++  ++i+e+d++ ++Pw+L+ k+  + ++++fF++          +nr+ ++gyWk+  ++++++  
  XP_021274871.1  10 LPPGFRFCPTDEELVLHFLYPKALLLPCHP-NIIPELDLHLLHPWELNGKALLSGNQYFFFTQM--------MENRVLENGYWKQLDTEEPIFGG 95 
                     79*************************999.89**************96555666777777664........4689******************* PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      g+++ +k+ + f+ ++ap g +t+W+m+ey+l
  XP_021274871.1  96 AGKKIAMKQFFLFHINEAPFGIETNWLMQEYHL 128
                     *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEMKDGCINL PPGFRFCPTD EELVLHFLYP KALLLPCHPN IIPELDLHLL HPWELNGKAL  60
LSGNQYFFFT QMMENRVLEN GYWKQLDTEE PIFGGAGKKI AMKQFFLFHI NEAPFGIETN  120
WLMQEYHLCN WDSTLTSYKP KGNQKLDCSK WVLCRVEESK GNSQSFSYSN EDDGTELSCL  180
DEMFLSMDDD LDDISSSKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-50NAC family protein