PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274842.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 372aa    MW: 41231.4 Da    PI: 6.2441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.1e-15168218256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +  + +taeeAa a+++a+ kl+ge
  XP_021274842.1 168 LYRGVRQRH-WGKWVAEIRXPKN---RTRLWAWHLDTAEEAALAYDKAAYKLRGE 218
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MAAAIDMYNS SSSSVFSDPF REELMKALEP FMKSASSTSP LAAASSSSSP TCSFSSYPSC  60
SYSKLTSPSQ PNMYPEFCSP SSTHLFSNHG FSNYNNLMGF EQTGSIGLNQ LTSSQILQIQ  120
AQIYQQQQQQ QLASMATTSS LQNQRLNFLS PKAVPMKHVS TPSKPTKLYR GVRQRHWGKW  180
VAEIRXPKNR TRLWAWHLDT AEEAALAYDK AAYKLRGEFA RLNFPHLKHQ GAHVSGEFGD  240
YKPLHSSVDA KLQAICQSLQ KQGNSGKTCS VSDSKPNSVA PSQPKVEVDY PVKSEEFDQS  300
PRFSDPKVEN SLSSSSSPEL SDESLAGSSS PESDISFLDF SDSKWEDNEN FGLEKYPSVE  360
IDWEAIRELS ES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.19e-59ERF family protein