PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274839.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 315aa    MW: 35133.9 Da    PI: 5.9991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.75e-094089154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  XP_021274839.1 40 RKVQKADREKLRRDRLNEQFLELGNTLDPD----RPKNDKATILMDTIQMLKDL 89
                    5677889********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDHQWKSNDF SKSVAADLGP SNPEPRQRQE VEVKDPMAAR KVQKADREKL RRDRLNEQFL  60
ELGNTLDPDR PKNDKATILM DTIQMLKDLT AEVNRLKAEC SSLTEESREL TQEKNELREE  120
KASLKVDIDN LNVQYQQRLR VMFPWNGIDP SVVMTPPYSY PVHLPVPAGP IPIHPSLQPY  180
PFFGNHNPGA IANPCSTFMP YSTTTNPPID QPSSQHASSS HTSIKRDSRS KSMDDQRGSN  240
GDRCDGSNDV ATELELKMPG SSTNQELSAG EKKAKQTQKE RSMVNGSSSS RYSSSQGLQD  300
SSSNCVDDVP KSTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-76bHLH family protein