PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274838.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 333aa    MW: 37341.1 Da    PI: 8.7855
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.5e-0971120154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  XP_021274838.1  71 RKVQKADREKLRRDRLNEQFLELGNTLDPD----RPKNDKATILMDTIQMLKDL 120
                     5677889********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MLSWFLFVAH LRFFSTKKIL LILVVRGKTS MDHQWKSNDF SKSVAADLGP SNPEPSRQRQ  60
EVEVKDPMAA RKVQKADREK LRRDRLNEQF LELGNTLDPD RPKNDKATIL MDTIQMLKDL  120
TAEVNRLKAE CSSLTEESRE LTQEKNELRE EKASLKVDID NLNVQYQQRL RVMFPWNGID  180
PSVVMTPPYS YPVHLPVPAG PIPIHPSLQP YPFFGNHNPG AIANPCSTFM PYSTTTNPPI  240
DQPSSQHASS SHTSIKRDSR SKSMDDQRGS NGDRCDGSND VATELELKMP GSSTNQELSA  300
GEKKAKQTQK ERSMVNGSSS SRVLASQSNM SGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.29e-77bHLH family protein