PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274836.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 345aa    MW: 38668.4 Da    PI: 7.5801
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.8e-0970119154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  XP_021274836.1  70 RKVQKADREKLRRDRLNEQFLELGNTLDPD----RPKNDKATILMDTIQMLKDL 119
                     5677889********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MLSWFLFVAH LRFFSTKKIL LILVVRGKTS MDHQWKSNDF SKSVAADLGP SNPEPRQRQE  60
VEVKDPMAAR KVQKADREKL RRDRLNEQFL ELGNTLDPDR PKNDKATILM DTIQMLKDLT  120
AEVNRLKAEC SSLTEESREL TQEKNELREE KASLKVDIDN LNVQYQQRLR VMFPWNGIDP  180
SVVMTPPYSY PVHLPVPAGP IPIHPSLQPY PFFGNHNPGA IANPCSTFMP YSTTTNPPID  240
QPSSQHASSS HTSIKRDSRS KSMDDQRGSN GDRCDGSNDV ATELELKMPG SSTNQELSAG  300
EKKAKQTQKE RSMVNGSSSS RYSSSQGLQD SSSNCVDDVP KSTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.16e-76bHLH family protein