PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274745.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 303aa    MW: 34798.4 Da    PI: 6.6312
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.22.4e-5171311128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtd+elv++yL++k++++++ +  +i+e+d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + 
  XP_021274745.1   7 LPPGFRFHPTDDELVNHYLCRKCASRPIAV-PIIAEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGK- 99 
                     79**************************99.88***************6666689*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +  g+kk Lvfy g+ap+g+kt+W+mheyrl
  XP_021274745.1 100 -PKPLGIKKALVFYAGKAPRGVKTNWIMHEYRL 131
                     .789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MKGELELPPG FRFHPTDDEL VNHYLCRKCA SRPIAVPIIA EIDLYKFDPW QLPDMALYGE  60
KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGKP KPLGIKKALV FYAGKAPRGV  120
KTNWIMHEYR LANVDRSAGK KSGNLRLDDW VLCRIYNKKG SIEKHFPSEQ KHFPSEQKWF  180
GYPEMEDQKP NILMNGQNIT TLSQQPSLMS TMMNDQPPTD DGSDSVPRLH TDSSSSEHVL  240
SPEITCEKEV QSEPKWNELS SALDFQFNYM DGFQDDPFGS QVQYQMDQLS PLQDMFAFLQ  300
KPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-118NAC family protein