PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274709.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WOX
Protein Properties Length: 284aa    MW: 31669.8 Da    PI: 6.2521
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.4e-203091257
                    T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+t+t++q+++L++l+++   r psae++++++++l    +++ ++V++WFqN++a+e++
  XP_021274709.1 30 STRWTPTTDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 91
                    58*****************8678*************************************97 PP

2Wus_type_Homeobox113.98e-372993265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_021274709.1 29 SSTRWTPTTDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 93
                       789***************9779*****************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEPQQQQNQQ HPNEDSSGSG KGSFLCRQSS TRWTPTTDQI RILKDLYYNN GVRSPSAEQI  60
QRISARLRQY GKIEGKNVFY WFQNHKARER QKKRFTTTDV PMQRPTVANG GWKADDPIHN  120
NKYPSTSPGY STASSSTGVL TVGQIGNYGY GSMTMEKSFR DCSISACGSS MGASESVSHN  180
FGWVGIDPAY SSPYTLFDKK KLIDGILEEE REDDEEEEAA APHIETLPLF PMHGEDINAF  240
CSNMKPSPES CYSGWYRSDD GYAGSRASLE LSLNSYTGRS QGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-52WOX family protein