PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WOX | ||||||||
Protein Properties | Length: 284aa MW: 31669.8 Da PI: 6.2521 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.7 | 5.4e-20 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++ XP_021274709.1 30 STRWTPTTDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 91 58*****************8678*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.9 | 8e-37 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_021274709.1 29 SSTRWTPTTDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 93 789***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MEPQQQQNQQ HPNEDSSGSG KGSFLCRQSS TRWTPTTDQI RILKDLYYNN GVRSPSAEQI 60 QRISARLRQY GKIEGKNVFY WFQNHKARER QKKRFTTTDV PMQRPTVANG GWKADDPIHN 120 NKYPSTSPGY STASSSTGVL TVGQIGNYGY GSMTMEKSFR DCSISACGSS MGASESVSHN 180 FGWVGIDPAY SSPYTLFDKK KLIDGILEEE REDDEEEEAA APHIETLPLF PMHGEDINAF 240 CSNMKPSPES CYSGWYRSDD GYAGSRASLE LSLNSYTGRS QGSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-52 | WOX family protein |