PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274469.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GATA | ||||||||
Protein Properties | Length: 248aa MW: 27789.7 Da PI: 8.2632 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.6 | 2.3e-20 | 132 | 166 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ XP_021274469.1 132 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 166 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MMHRCSSSQG NMVGPCSCGL FHNQSNSFSM LFSMPNHHKS FDETDMYAYT SSSSSSVDCT 60 LSLGTPSTRL CEDDDKRIRH DRRSGSCMSN FCWDLLQNKN APYSQQTPKA SRGSSGKSSS 120 SSCNDPLLAR RCANCDTTST PLWRNGPRGP KSLCNACGIR FKKEERRATA NANNSGTTGS 180 MLEQQHHGYH NNSWVQHSQN QKMPCFSPVN EFRFIEDSDR DSDTGIPFLS WRLNVTDRPT 240 SLVHDFTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 7e-68 | GATA family protein |