PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 329aa MW: 37040.8 Da PI: 4.6969 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 5.8e-19 | 57 | 110 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_021274399.1 57 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 110 566899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.7 | 2.5e-41 | 56 | 148 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++y++lk + ++L++++e+L +e++e XP_021274399.1 56 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKTSYETLKVNYDTLQHDNEALLKEIRE 148 69*************************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MKRLGSSDSL GALMSICPTT DEHSPRNNHI YSREFQSMLD GLDEEGCVEE SGHVAEKKRR 60 LSVDQVKALE KNFEVENKLE PERKVKLAQE LGLQPRQVAV WFQNRRARWK TKQLERDYGL 120 LKTSYETLKV NYDTLQHDNE ALLKEIRELK AKLNGESTES NLSVKEEVIV HETDNKTLEQ 180 SEPPPVSSLV TSSEPAELNY ESFNNSIGSV GATLFPDLKD GSSDSDSSAI LNEDNNNCSP 240 NNAAISSSGV LQSQHLLMSP TTTSSLNFNS SSSSPSSMNC FQFSKTTYQP PHQYVKMEEH 300 NFFSADEACN FFSDEQAPSL HWYSPEQWN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 86 | KKRRLSVDQVKALEKNFEVENKLEPERKVK |
2 | 105 | 113 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G40060.1 | 3e-75 | HD-ZIP family protein |