PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274371.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 323aa MW: 34999.8 Da PI: 9.1736

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.4	4.2e-40	31	91	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk + XP_021274371.1 31 QEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 91 5799******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MMSPDNPPVK PATKEENQSG SNRKAASTRP QEQALKCPRC DSPNTKFCYY NNYSLTQPRH 60 FCKTCRRYWT KGGALRNVPI GGGCRKNKKI KSSSRLSGDS KDSTSSSEMG GLKFFHGLSP 120 AMDFQLGGLS FPRLNPSPPG IYNQFASFAD STSPSFSLDP SGSSNSLMGL SNYPLSSVTS 180 GLSGAIQEMG SLNVNSSLAS SIESLSSINQ DLHWKLQQQR LAMLFGGENQ KENSTVSSVP 240 LDNQAQKPQP ILFQNLEVSK PEISAVGNPR KGTSNETATE WFFGSSYAPV TPTPTSSSNG 300 NDNTSNWNGV QAWNDLHQYS TLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	6e-55	Dof family protein