PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274298.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 101aa    MW: 11787.2 Da    PI: 9.7497
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.8e-081457344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+e  + + +a +++  +   +W +Ia+ +g g  + ++k  +
   XP_021274298.1 14 NWTPEQNKMFENALAKYDADvpdRWQKIAKLVG-GTNEQEVKRQY 57
                     8********************************.99999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MRSSQFSSSS YDSNWTPEQN KMFENALAKY DADVPDRWQK IAKLVGGTNE QEVKRQYEIL  60
LDDIKRIESG KVPLPKYRRN EGSSRINGIS NEEQRLKHLK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.16e-31MYB_related family protein