PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274153.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 370aa    MW: 41115.4 Da    PI: 9.4214
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.11e-33156210459
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +rY+eC+kNhAas+Ggh++DGCgEfmps geegt++alkCaAC+CHRnFHR+e + 
  XP_021274153.1 156 IRYRECMKNHAASMGGHVMDGCGEFMPS-GEEGTPEALKCAACECHRNFHRKEING 210
                     79*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MLKQSCLCLL GLNLMELLTV RVFLHQKLMS DQFNSSRDSS SKVSSSAPIN SGVGERRRDQ  60
TVHGGTTVLN PNPPQALDLH PLYHPELNPQ HQIHKPRRDP NPDPDPVSAT TATTSATVTA  120
SANRSSLKSP QQQPPTSQPP PVAAASPTTI SSTPLIRYRE CMKNHAASMG GHVMDGCGEF  180
MPSGEEGTPE ALKCAACECH RNFHRKEING ETQYAPSCYY YSYNPNKNNN RRDTTHPPSQ  240
LHPQQPIPLH QQRFSLGLST SPTAMPIAPV MMNFGGGGPA ESSSEDLNMF HSNAGGQISA  300
QPQSSKKRFR TKFSQEQKDK MMEFAEKLGW RIQKQDEQEV QQFCAQVGVK RQVFKVWMHN  360
NKQAMKKKQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.13e-67ZF-HD family protein