PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ZF-HD | ||||||||
Protein Properties | Length: 253aa MW: 27726.3 Da PI: 9.1849 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 94.6 | 8.4e-30 | 48 | 103 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + vrY+eClkNhAa++Gg+a+DGCgEf+ps geeg+ +a+kC+AC+CHRnFHR+eve XP_021274129.1 48 KVVRYRECLKNHAAAMGGNATDGCGEFLPS-GEEGSLEAFKCSACNCHRNFHRKEVE 103 679**************************9.999********************987 PP | |||||||
2 | Homeobox | 16.7 | 1.3e-05 | 187 | 243 | 1 | 53 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRa 53 +r Rt+ft+eq + + ++ e + ++++++ ++ ++lg++ r+ kvW +N ++ XP_021274129.1 187 KRFRTKFTQEQKDKMFNFAEkagwRIQKLDESVVQQFCQELGIKRRVLKVWMHNNKQ 243 789**********9977666776679****************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MNSASPRREK DVPISRNCGG NGHSIFSSGV GTGPPSPSMD ENLRAHKKVV RYRECLKNHA 60 AAMGGNATDG CGEFLPSGEE GSLEAFKCSA CNCHRNFHRK EVECDCPFDC YHSALLNNAA 120 GRKLILGVPH HNYILGASAA AGTLISSRAE PPHQMIMSYK GGSIPSETDE KDDGGGGAAR 180 VSGKVRKRFR TKFTQEQKDK MFNFAEKAGW RIQKLDESVV QQFCQELGIK RRVLKVWMHN 240 NKQSLAKKDT SEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 1e-68 | ZF-HD family protein |