PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274006.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 842aa MW: 96559.2 Da PI: 7.0435

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.9	6.9e-28	80	166	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e++ ++r++++++t+Cka+++vk++ dgkw ++++++eHnHel p XP_021274006.1 80 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDVG---SSRRSSVKKTDCKASMHVKRRPDGKWIIHEFVKEHNHELLP 166 9*************************************999877...889999******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence
MIKVRENQNA ISNMVDCRDA VPCNDGVNEN MVDSVDEAAH GRDGVIVDSS KRAVIGFEGD 60 TDFEPRNGIE FESHEAAYAF YQEYAKSMGF TTSIKNSRRS KKSKEFIDAK FACSRYGVTP 120 ESDVGSSRRS SVKKTDCKAS MHVKRRPDGK WIIHEFVKEH NHELLPALAY HFRIYRNVKL 180 AEKNNIDILN AVSERTRKMY VEMTRQSGGY QNVSFLQNDM KNQFDKGRHL AVDEGDAQIM 240 LEYFKRIKKE NPDFFYAIDL NEEQCLRNLF WVDAKSRNDY ASFSDVVSFD TTYVKFNEKL 300 PFAPFVGVNH HFQSMLLGCA LLADETKPTF VWLMKTWLRA MGGQAPKVII TDQDKALKAA 360 VEEVFPTARH CFALWHILEK IPKSLAHVIG PHENFLPKFN KCIFKSWTDE GFDMRWWKMI 420 TRFELQDDEW VQSLYEDRKR WVPTFMDDVF LAGMSTSQRS ESMNSFFDKY IHKKITLKEF 480 VKQYGAILQN RYEEEAVADF DTWQKQPALK SPSPWEKQMS IVYTHAIFKK FQVEVLGVVG 540 CHPKRENEDE GTIKFRVQDC EKDENFMVIW NEEKSEVSCS CRMFEYRGFL CRHAMIVLQM 600 CGRTSIPPCY ILKRWTKDAK SGQSTAEGTD RVQTRVQRYN DLCKQAIELS EEGSLSEESH 660 NIAFRALVEA LKSCVNINNS CISAVESIGQ AHGLRETVEE NQGTLASKSS KKKTTNKKRK 720 GQSEPALMFV DTQDSLQQME NLSSDGISLN GYYGAQQNVQ GLVQLNLMEP PHDGYYVNQQ 780 SMQGLGQLNS IAPGHDSFFG TQQSMHGLGQ LDYRPSASFS YALQDEPQLR STQLHGGVSR 840 HP

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence

MIKVRENQNA ISNMVDCRDA VPCNDGVNEN MVDSVDEAAH GRDGVIVDSS KRAVIGFEGD  60
TDFEPRNGIE FESHEAAYAF YQEYAKSMGF TTSIKNSRRS KKSKEFIDAK FACSRYGVTP  120
ESDVGSSRRS SVKKTDCKAS MHVKRRPDGK WIIHEFVKEH NHELLPALAY HFRIYRNVKL  180
AEKNNIDILN AVSERTRKMY VEMTRQSGGY QNVSFLQNDM KNQFDKGRHL AVDEGDAQIM  240
LEYFKRIKKE NPDFFYAIDL NEEQCLRNLF WVDAKSRNDY ASFSDVVSFD TTYVKFNEKL  300
PFAPFVGVNH HFQSMLLGCA LLADETKPTF VWLMKTWLRA MGGQAPKVII TDQDKALKAA  360
VEEVFPTARH CFALWHILEK IPKSLAHVIG PHENFLPKFN KCIFKSWTDE GFDMRWWKMI  420
TRFELQDDEW VQSLYEDRKR WVPTFMDDVF LAGMSTSQRS ESMNSFFDKY IHKKITLKEF  480
VKQYGAILQN RYEEEAVADF DTWQKQPALK SPSPWEKQMS IVYTHAIFKK FQVEVLGVVG  540
CHPKRENEDE GTIKFRVQDC EKDENFMVIW NEEKSEVSCS CRMFEYRGFL CRHAMIVLQM  600
CGRTSIPPCY ILKRWTKDAK SGQSTAEGTD RVQTRVQRYN DLCKQAIELS EEGSLSEESH  660
NIAFRALVEA LKSCVNINNS CISAVESIGQ AHGLRETVEE NQGTLASKSS KKKTTNKKRK  720
GQSEPALMFV DTQDSLQQME NLSSDGISLN GYYGAQQNVQ GLVQLNLMEP PHDGYYVNQQ  780
SMQGLGQLNS IAPGHDSFFG TQQSMHGLGQ LDYRPSASFS YALQDEPQLR STQLHGGVSR  840
HP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein