PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021273906.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 344aa MW: 37808.7 Da PI: 4.4759

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021273906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.9	4.2e-49	6	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtd elv++yL++kv gkkl + e+i+e+diyk+ PwdLp +++k+++ +w+fF++ +kkya+g r nrat gyWk+tgkd++v+ XP_021273906.1 6 LAPGFRFHPTDVELVKYYLERKVLGKKLAF-EAIAELDIYKYAPWDLPdlSCLKTGDLKWFFFCPIEKKYARGARFNRATMYGYWKTTGKDRTVT 99 579**********************999.89**********96448899999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++++vg+ ktLvf++g+ap+g +tdWvmheyrle XP_021273906.1 100 Y-NDAVVGMIKTLVFHQGKAPRGDRTDWVMHEYRLE 134 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGKNLLAPGF RFHPTDVELV KYYLERKVLG KKLAFEAIAE LDIYKYAPWD LPDLSCLKTG 60 DLKWFFFCPI EKKYARGARF NRATMYGYWK TTGKDRTVTY NDAVVGMIKT LVFHQGKAPR 120 GDRTDWVMHE YRLEEKELAD RGVVQDTYVL CVVFKKDGMG PRNGAQYGAP FKEEDWSDDE 180 DVNLVGTGSL SGMSTLAVGG ASSSCVPESL CAGASVASSG LYTLPQVVHT NAAASVTTDI 240 DSNANAAPTV VDAPQVPVVV DKAVPASMEA PQLAQGPQAQ ESNDDVLSML KFFREDDAFI 300 MYDNGPVTGT NNDSFFEAPK VSEDDDISSM LAFFMEDNNL NCVL

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGKNLLAPGF RFHPTDVELV KYYLERKVLG KKLAFEAIAE LDIYKYAPWD LPDLSCLKTG  60
DLKWFFFCPI EKKYARGARF NRATMYGYWK TTGKDRTVTY NDAVVGMIKT LVFHQGKAPR  120
GDRTDWVMHE YRLEEKELAD RGVVQDTYVL CVVFKKDGMG PRNGAQYGAP FKEEDWSDDE  180
DVNLVGTGSL SGMSTLAVGG ASSSCVPESL CAGASVASSG LYTLPQVVHT NAAASVTTDI  240
DSNANAAPTV VDAPQVPVVV DKAVPASMEA PQLAQGPQAQ ESNDDVLSML KFFREDDAFI  300
MYDNGPVTGT NNDSFFEAPK VSEDDDISSM LAFFMEDNNL NCVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	1e-100	NAC family protein