PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021273902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 239aa MW: 25754.7 Da PI: 10.6293 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 254.5 | 6.4e-78 | 42 | 239 | 104 | 301 |
GAGA_bind 104 gtksidslqqlsepqledsave..lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidl 196 g +s++ q ++ep l ++ ++ +e +++ + ++ ++ +++ + k++++ k+ + k++kkk++++kk + + +++++ekk++++ XP_021273902.1 42 GLSSLQGAQIHHEPGLVVAPIRsiAPTTESGKNNDLGSKSAKVGKQNPSVKGSNQIASKVLRPKQPKKKPSVPKKAKGTII--PEARREKKNLNI 134 55666666666666665555554355666666777777777777777777799999999999******9999866555554..89********** PP GAGA_bind 197 vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAk 291 l+g ++D s++P P+CsCtG+ r+CYkWG+GGWqS+CCt++iS yPLP+s++r+gaR+agrKmS+ga+ klL +LaaeG+dls+pvDLkdhWA+ XP_021273902.1 135 DLDGTNFDFSGVPSPICSCTGVARVCYKWGAGGWQSSCCTINISEYPLPMSSTRPGARMAGRKMSNGAYLKLLLRLAAEGHDLSHPVDLKDHWAR 229 *********************************************************************************************** PP GAGA_bind 292 HGtnkfvtir 301 HGtnkfvti+ XP_021273902.1 230 HGTNKFVTIK 239 *********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MVAMKMGSYS NKSMMPETNT GSSVSPFSLF YTGNYIPTSR PGLSSLQGAQ IHHEPGLVVA 60 PIRSIAPTTE SGKNNDLGSK SAKVGKQNPS VKGSNQIASK VLRPKQPKKK PSVPKKAKGT 120 IIPEARREKK NLNIDLDGTN FDFSGVPSPI CSCTGVARVC YKWGAGGWQS SCCTINISEY 180 PLPMSSTRPG ARMAGRKMSN GAYLKLLLRL AAEGHDLSHP VDLKDHWARH GTNKFVTIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35550.3 | 9e-73 | BBR-BPC family protein |