PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021273891.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 374aa MW: 41918.1 Da PI: 5.7158

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021273891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105	4.3e-33	237	292	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_021273891.1 237 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 292 79****************************************************97 PP
2	Myb_DNA-binding	46.9	6.3e-15	239	290	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I + m+ g+t ++ks++qky+ XP_021273891.1 239 RRCWSPELHRRFVDALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 290 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MELSLDLGLA YVPKSISEFL EEVSDIKNGF QRLSKISDYV KRLEDEMKKI DAFKRELPLC 60 MLLLKDGIER LKEEEMQCKE MNDGSVTEEL MLPLKSNTEE NRGVNMENDG GDKKNWMSSV 120 QLWNSNFNNV DHNKKANAVQ ELKLGSEDED LSEKPIELCN NKSKKGAFLP FKGQVDEEIS 180 GLSLMTPSSE LASCNPILKS DSSCRIGSGS SLYTEQNQIK FQTKSQHQQQ QQQNSRKQRR 240 CWSPELHRRF VDALQQLGGS QVATPKQIRE LMQVDGLTND EVKSHLQKYR LHIRKLPPSS 300 AGQGNGLWSA QNQCSVHMKA NISQSGSPQG PLLATGSAKD MSSTGGDSME AEEDEKSDGH 360 SWRGVVHKQG EIDV

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MELSLDLGLA YVPKSISEFL EEVSDIKNGF QRLSKISDYV KRLEDEMKKI DAFKRELPLC  60
MLLLKDGIER LKEEEMQCKE MNDGSVTEEL MLPLKSNTEE NRGVNMENDG GDKKNWMSSV  120
QLWNSNFNNV DHNKKANAVQ ELKLGSEDED LSEKPIELCN NKSKKGAFLP FKGQVDEEIS  180
GLSLMTPSSE LASCNPILKS DSSCRIGSGS SLYTEQNQIK FQTKSQHQQQ QQQNSRKQRR  240
CWSPELHRRF VDALQQLGGS QVATPKQIRE LMQVDGLTND EVKSHLQKYR LHIRKLPPSS  300
AGQGNGLWSA QNQCSVHMKA NISQSGSPQG PLLATGSAKD MSSTGGDSME AEEDEKSDGH  360
SWRGVVHKQG EIDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	3e-67	G2-like family protein