PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021273863.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 397aa MW: 43106.8 Da PI: 4.8542 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.3 | 4.2e-16 | 153 | 200 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ +k +Ka++L +A++Y+k+Lq XP_021273863.1 153 VHNLSEKRRRSRINEKMKALQNLIPNS----NKQTDKASMLDEAIDYLKQLQ 200 6*************************9....899*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence |
MGDNINVNMF HYNNNYTATN DNNSNNGNCL SSASDDISNL LHQILVRSSS PSPGMAHLEG 60 PTENPRQMSR SPAPAGGEAK QGMILTVDSC GRGSGGSGLV GVAGEINDTE EYDCESEFES 120 CHKQEGLEAL VDEAPSKPAP PRSSSKRSRA AEVHNLSEKR RRSRINEKMK ALQNLIPNSN 180 KQTDKASMLD EAIDYLKQLQ LQVQMLSMRN GLSLHPMCLS GVLQPIQLPQ TRIDFGEDNG 240 SLPMNASGTV PANQEPSAQI VFDLPNQCGS SNHASVPNMS NIITSEISFS LESIQAQFGP 300 FQLLTPTQDI CREDIMPHHQ VKSNTSEFGS GATSTVSLPF DTRESDLKES NSLDASMMGR 360 DQPNSVLEHD LIVAPHLTRQ AGRSDSSDNI KIEKPNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 5e-49 | bHLH family protein |