PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021273845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27722.3 Da PI: 10.5432 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8.1e-09 | 84 | 129 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er RR+ri + ++ Lr++lP++ K++Ka++L ++++ +++L XP_021273845.1 84 RHRIAERHRRKRICQQYDILRSILPNL-----IKMDKASVLGETIRQVREL 129 599***********************9.....6************988877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MFDTSILIYE EQFLLEANLR SSMVRLKQLE QDIQQPVGGY YSSALCSRPN SLSQQVIPTI 60 DILLKCLPRK TKSKAETNIA NAVRHRIAER HRRKRICQQY DILRSILPNL IKMDKASVLG 120 ETIRQVRELK KRVKETKAVC RGSLEGVLPG ESDNLSLGYC ENDGSLLKAT FSCDDRAELI 180 SDLTRAVRTV NGRVVRAEMV FLGGRNKSVL WVKGLSGNEG IGMLKRALKM AVDRPKIKNG 240 KPRFAH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 134 | RRKRICQQYDILRSILPNLIKMDKASVLGETIRQVRELKKRVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 4e-29 | bHLH family protein |