PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021273745.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 380aa    MW: 41276.5 Da    PI: 7.1498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021273745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20174223255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a+++a+++++g
  XP_021273745.1 174 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAARAYDEAALRFRG 223
                     7********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MCQIKKVANK KGKVEISRGS VVDQDNQWLL MYQPHMMREE GSSSMLSEDR REREMSAMVS  60
ALTHVVAGDV PDDQELAGDG NSDGCDSSIG NYINTTSSWG FGGQKRGREE EGAGGAMAVE  120
SVSKLCSQFG KFPHGGRGSS SAGVRVTEAN APAQLVPTYE YTSNDNYREE PRRRYRGVRQ  180
RPWGKWAAEI RDPFKAARVW LGTFDTAEAA ARAYDEAALR FRGNKAKLNF PENVKLRSPP  240
SNPATAQFTT CDSATTLMSI PTSTEPIVHS QSNYLVQNPQ VSGGYLDYPQ FVLGPSNDFP  300
KQQQQQPLNL YEQRVLSTSV GSLAQCCSST SSSSSKSYPL AFPSQPSGYH LNLASSQGGG  360
VGDFSVHTSS DSSHYTSTSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.13e-19ERF family protein